EEB66742.1 protein (Capnocytophaga sputigena)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EEB66742.1

TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715. (1004 aa)

Predicted Functional Partners:

EEB66629.1

0.877

EEB66613.1

0.856

EEB66642.1

0.854

EEB64814.1

0.759

EEB65267.1

0.737

EEB66710.1

0.702

EEB65698.1

0.669

EEB66325.1

0.653

EEB64651.1

0.650

EEB64868.1

0.644

Your Current Organism:

Capnocytophaga sputigena

NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEB64651.1	EEB64814.1	CAPSP0001_1021	CAPSP0001_2610	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.727
EEB64651.1	EEB65267.1	CAPSP0001_1021	CAPSP0001_0433	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.714
EEB64651.1	EEB66742.1	CAPSP0001_1021	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.650
EEB64814.1	EEB64651.1	CAPSP0001_2610	CAPSP0001_1021	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.727
EEB64814.1	EEB64868.1	CAPSP0001_2610	CAPSP0001_2554	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.684
EEB64814.1	EEB66642.1	CAPSP0001_2610	CAPSP0001_1146	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07494; match to protein family HMM PF07495.	0.651
EEB64814.1	EEB66710.1	CAPSP0001_2610	CAPSP0001_1139	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07495.	0.681
EEB64814.1	EEB66742.1	CAPSP0001_2610	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.759
EEB64868.1	EEB64814.1	CAPSP0001_2554	CAPSP0001_2610	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.684
EEB64868.1	EEB65267.1	CAPSP0001_2554	CAPSP0001_0433	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.685
EEB64868.1	EEB66742.1	CAPSP0001_2554	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.644
EEB65267.1	EEB64651.1	CAPSP0001_0433	CAPSP0001_1021	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.714
EEB65267.1	EEB64868.1	CAPSP0001_0433	CAPSP0001_2554	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07980.	0.685
EEB65267.1	EEB66642.1	CAPSP0001_0433	CAPSP0001_1146	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07494; match to protein family HMM PF07495.	0.467
EEB65267.1	EEB66710.1	CAPSP0001_0433	CAPSP0001_1139	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07495.	0.538
EEB65267.1	EEB66742.1	CAPSP0001_0433	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.737
EEB65698.1	EEB66742.1	CAPSP0001_1757	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.669
EEB66325.1	EEB66642.1	CAPSP0001_0161	CAPSP0001_1146	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07494; match to protein family HMM PF07495.	0.458
EEB66325.1	EEB66710.1	CAPSP0001_0161	CAPSP0001_1139	Identified by match to protein family HMM PF07980.	Identified by match to protein family HMM PF07495.	0.597
EEB66325.1	EEB66742.1	CAPSP0001_0161	CAPSP0001_1147	Identified by match to protein family HMM PF07980.	TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.653

page 1 of 3

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About