STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66189.1TonB-dependent receptor; Identified by match to protein family HMM PF00593. (751 aa)    
Predicted Functional Partners:
ziaA
Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403.
 
     0.946
EEB65411.1
Hypothetical protein.
  
 
   0.577
EEB66544.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.570
EEB66199.1
Hypothetical protein; Identified by glimmer; putative.
       0.568
EEB66503.1
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
  
     0.544
EEB66142.1
Hypothetical protein.
 
     0.526
EEB65382.1
HYR domain protein; Identified by match to protein family HMM PF02494.
  
 
   0.520
EEB66712.1
Hypothetical protein.
 
  
 0.500
EEB66667.1
Oxidoreductase NAD-binding domain protein; Identified by match to protein family HMM PF00175; match to protein family HMM PF00258; match to protein family HMM PF03929.
 
  
 0.490
EEB66027.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.485
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.