Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEB65585.1 | EEB65801.1 | CAPSP0001_0902 | CAPSP0001_0543 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | 0.491 |
| EEB65585.1 | EEB66056.1 | CAPSP0001_0902 | CAPSP0001_1921 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | 0.831 |
| EEB65585.1 | EEB66683.1 | CAPSP0001_0902 | CAPSP0001_1058 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.491 |
| EEB65585.1 | dnaK | CAPSP0001_0902 | CAPSP0001_0332 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.485 |
| EEB65585.1 | ksgA | CAPSP0001_0902 | CAPSP0001_1267 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.471 |
| EEB65585.1 | rlmB_2 | CAPSP0001_0902 | CAPSP0001_0515 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | 0.491 |
| EEB65585.1 | rnr | CAPSP0001_0902 | CAPSP0001_1663 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.559 |
| EEB65585.1 | rpsA | CAPSP0001_0902 | CAPSP0001_1257 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.815 |
| EEB65585.1 | trmH | CAPSP0001_0902 | CAPSP0001_1357 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | RNA methyltransferase, TrmH family; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.491 |
| EEB65801.1 | EEB65585.1 | CAPSP0001_0543 | CAPSP0001_0902 | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | 0.491 |
| EEB65801.1 | EEB66683.1 | CAPSP0001_0543 | CAPSP0001_1058 | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.427 |
| EEB65801.1 | metG | CAPSP0001_0543 | CAPSP0001_2164 | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.416 |
| EEB65801.1 | rnr | CAPSP0001_0543 | CAPSP0001_1663 | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.551 |
| EEB66056.1 | EEB65585.1 | CAPSP0001_1921 | CAPSP0001_0902 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | 0.831 |
| EEB66056.1 | rnr | CAPSP0001_1921 | CAPSP0001_1663 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.824 |
| EEB66683.1 | EEB65585.1 | CAPSP0001_1058 | CAPSP0001_0902 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | 0.491 |
| EEB66683.1 | EEB65801.1 | CAPSP0001_1058 | CAPSP0001_0543 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA methyltransferase, TrmH family; Identified by match to protein family HMM PF00588. | 0.427 |
| EEB66683.1 | metG | CAPSP0001_1058 | CAPSP0001_2164 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.416 |
| EEB66683.1 | rnr | CAPSP0001_1058 | CAPSP0001_1663 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.551 |
| dnaK | EEB65585.1 | CAPSP0001_0332 | CAPSP0001_0902 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; Belongs to the DEAD box helicase family. | 0.485 |
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