STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65703.1Hypothetical protein. (579 aa)    
Predicted Functional Partners:
EEB65620.1
Hypothetical protein.
 
 
   0.882
EEB65698.1
Identified by match to protein family HMM PF07980.
  
   0.827
EEB66748.1
Identified by match to protein family HMM PF07980.
  
   0.431
EEB65195.1
Identified by match to protein family HMM PF07980.
  
   0.417
EEB64868.1
Identified by match to protein family HMM PF07980.
  
   0.411
EEB65267.1
Identified by match to protein family HMM PF07980.
  
   0.402
EEB66629.1
Identified by match to protein family HMM PF07980.
  
   0.402
EEB66923.1
Identified by match to protein family HMM PF07980.
  
   0.402
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.