STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65945.1Tetratricopeptide repeat protein. (174 aa)    
Predicted Functional Partners:
gldM
Gliding motility-associated protein GldM; Identified by match to protein family HMM TIGR03517.
  
     0.723
EEB65090.1
Hypothetical protein.
  
     0.714
EEB65933.1
Hypothetical protein.
  
     0.707
gldN
Gliding motility-associated protein GldN; Identified by match to protein family HMM TIGR03523.
  
     0.700
EEB66930.1
Hypothetical protein.
  
     0.681
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.649
gldI
Peptidyl-prolyl isomerase, gliding motility-associated; Identified by match to protein family HMM PF00254; match to protein family HMM TIGR03516.
  
     0.627
EEB66302.1
Metal cation transporter, ZIP family; Identified by match to protein family HMM PF02535.
  
     0.618
EEB65241.1
Hypothetical protein.
  
     0.617
EEB66374.1
Hypothetical protein.
 
     0.612
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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