STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bshCBacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family. (533 aa)    
Predicted Functional Partners:
bshB1
Bacillithiol biosynthesis deacetylase BshB1; Identified by match to protein family HMM PF02585.
 
   
 0.785
bshA
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; Identified by match to protein family HMM PF00534.
  
   
 0.780
EEB66515.1
Identified by match to protein family HMM PF06491; Belongs to the UPF0403 family.
  
   
 0.779
EEB64787.1
Hypothetical protein.
       0.732
EEB64460.1
Hypothetical protein.
  
     0.653
EEB66213.1
Hypothetical protein.
  
     0.653
EEB66086.1
Hypothetical protein.
  
  
 0.616
EEB64752.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.507
EEB64932.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.