STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66894.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
EEB64462.1
2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
 
 0.939
EEB66815.1
Hypothetical protein.
 
     0.903
EEB66641.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Identified by match to protein family HMM PF03417; match to protein family HMM PF07719.
 
     0.810
EEB65491.1
Acyltransferase; Identified by match to protein family HMM PF01553.
 
     0.799
EEB66631.1
Hypothetical protein.
 
     0.772
EEB64792.1
Hypothetical protein.
 
     0.770
EEB64790.1
Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.769
EEB64825.1
Outer membrane lipoprotein carrier protein LolA; Identified by match to protein family HMM PF03548.
 
    0.754
EEB66733.1
FabA-like domain protein; Identified by match to protein family HMM PF07977.
 
     0.751
EEB66603.1
Hypothetical protein.
 
     0.724
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.