STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66937.1Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (715 aa)    
Predicted Functional Partners:
EEB66976.1
Hypothetical protein; Identified by glimmer; putative.
       0.671
EEB66906.1
Hypothetical protein; Identified by glimmer; putative.
       0.588
EEB66285.1
Peptidase, S9A/B/C family, catalytic domain protein; Identified by match to protein family HMM PF00326; match to protein family HMM PF00930.
  
     0.558
EEB66962.1
Putative dGTPase; Identified by match to protein family HMM TIGR01353.
       0.530
EEB65780.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF01476; match to protein family HMM PF01832.
  
   0.447
xth
Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
  
    0.445
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.444
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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