STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB66961.1Glycosyl hydrolase family 32; Identified by match to protein family HMM PF00251. (486 aa)    
Predicted Functional Partners:
EEB66848.1
Kinase, PfkB family; Identified by match to protein family HMM PF00294.
 
 
 0.952
EEB66948.1
Hypothetical protein.
 
    0.940
EEB66752.1
Glycosyl hydrolase family 3 N-terminal domain protein; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915; Belongs to the glycosyl hydrolase 3 family.
  
 
  0.922
EEB65259.1
Glycosyl hydrolase, family 31; Identified by match to protein family HMM PF01055; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.909
EEB66766.1
Glycosyl hydrolase family 32; Identified by match to protein family HMM PF00251; match to protein family HMM PF08244; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.838
EEB66923.1
Identified by match to protein family HMM PF07980.
 
     0.823
EEB66851.1
TonB-linked outer membrane protein, SusC/RagA family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
     0.781
EEB66907.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF00532; match to protein family HMM PF02518.
  
  
 0.649
EEB66977.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF05978; match to protein family HMM PF07690.
 
    0.505
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.