STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB64846.1Auxiliary transport protein, membrane fusion protein (MFP) family protein; Identified by match to protein family HMM PF00529. (327 aa)    
Predicted Functional Partners:
EEB64865.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
 
 0.966
EEB64845.1
Hypothetical protein.
 
  
 0.832
EEB64829.1
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
 
  
 0.832
czcA-2
Heavy metal efflux pump, CzcA family; Identified by match to protein family HMM PF00873; match to protein family HMM PF02321; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.744
EEB65548.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845.
 
 
 0.662
EEB64866.1
Identified by match to protein family HMM PF00903.
       0.618
EEB64946.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
 
 0.603
EEB65085.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
 
 0.589
EEB64759.1
Hypothetical protein.
  
 
 0.589
EEB64471.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
 
 0.589
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.