STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB65188.1Identified by match to protein family HMM PF00691; match to protein family HMM PF02412. (454 aa)    
Predicted Functional Partners:
EEB65151.1
Hypothetical protein.
 
      0.828
EEB66866.1
Identified by match to protein family HMM PF00691.
  
 
 0.768
EEB66337.1
Identified by match to protein family HMM PF00691.
  
  
 
0.603
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.541
EEB64694.1
Identified by match to protein family HMM PF00691; match to protein family HMM PF07676.
  
  
0.466
EEB64804.1
Identified by match to protein family HMM PF00691; match to protein family HMM PF07676.
  
  
0.464
EEB66374.1
Hypothetical protein.
  
   0.458
EEB66852.1
Outer membrane protein; Identified by match to protein family HMM PF03938.
  
   0.457
glgP
Alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM PF05693; match to protein family HMM TIGR02094.
  
  
 0.456
EEB66136.1
LysM domain protein; Identified by match to protein family HMM PF01476.
  
 
 0.449
Your Current Organism:
Capnocytophaga sputigena
NCBI taxonomy Id: 553177
Other names: C. sputigena ATCC 33612, Capnocytophaga sputigena ATCC 33612, Capnocytophaga sputigena Capno, Capnocytophaga sputigena str. ATCC 33612, Capnocytophaga sputigena strain ATCC 33612
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.