STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEK14892.1Ankyrin repeat protein; Identified by match to protein family HMM PF00023. (350 aa)    
Predicted Functional Partners:
EEK14927.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Identified by match to protein family HMM PF00160; match to protein family HMM PF00254.
    
 0.785
EEK15814.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Identified by match to protein family HMM PF00160; match to protein family HMM PF00254.
    
 0.785
EEK14960.1
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
     0.747
EEK14902.1
SMI1 / KNR4 family protein; Identified by match to protein family HMM PF09346.
       0.610
EEK15627.1
MORN repeat protein; Identified by match to protein family HMM PF02493.
  
  0.558
EEK14910.1
Exonuclease; Identified by match to protein family HMM PF00929.
 
     0.525
EEK14884.1
Identified by match to protein family HMM PF01139.
  
   0.523
EEK14106.1
Hypothetical protein.
  
 0.521
EEK14917.1
Hypothetical protein.
       0.501
EEK14907.1
Hypothetical protein; Identified by glimmer; putative.
       0.501
Your Current Organism:
Capnocytophaga gingivalis
NCBI taxonomy Id: 553178
Other names: C. gingivalis ATCC 33624, Capnocytophaga gingivalis ATCC 33624, Capnocytophaga gingivalis JCVIHMP016, Capnocytophaga gingivalis str. ATCC 33624, Capnocytophaga gingivalis strain ATCC 33624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.