Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEK13407.1 | EEK15688.1 | CAPGI0001_2440 | CAPGI0001_0895 | Arylsulfatase; Identified by match to protein family HMM PF00884. | Identified by match to protein family HMM PF01569. | 0.547 |
| EEK13484.1 | EEK14748.1 | CAPGI0001_1908 | CAPGI0001_1265 | AMP-binding domain protein; Identified by match to protein family HMM PF00501. | Putative DNA-directed RNA polymerase, omega subunit. | 0.452 |
| EEK13484.1 | EEK15688.1 | CAPGI0001_1908 | CAPGI0001_0895 | AMP-binding domain protein; Identified by match to protein family HMM PF00501. | Identified by match to protein family HMM PF01569. | 0.597 |
| EEK13484.1 | rplF | CAPGI0001_1908 | CAPGI0001_0431 | AMP-binding domain protein; Identified by match to protein family HMM PF00501. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.764 |
| EEK13542.1 | EEK14748.1 | CAPGI0001_1931 | CAPGI0001_1265 | O-succinylbenzoic acid--CoA ligase. | Putative DNA-directed RNA polymerase, omega subunit. | 0.452 |
| EEK13542.1 | EEK15688.1 | CAPGI0001_1931 | CAPGI0001_0895 | O-succinylbenzoic acid--CoA ligase. | Identified by match to protein family HMM PF01569. | 0.597 |
| EEK13542.1 | rplF | CAPGI0001_1931 | CAPGI0001_0431 | O-succinylbenzoic acid--CoA ligase. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.764 |
| EEK14748.1 | EEK13484.1 | CAPGI0001_1265 | CAPGI0001_1908 | Putative DNA-directed RNA polymerase, omega subunit. | AMP-binding domain protein; Identified by match to protein family HMM PF00501. | 0.452 |
| EEK14748.1 | EEK13542.1 | CAPGI0001_1265 | CAPGI0001_1931 | Putative DNA-directed RNA polymerase, omega subunit. | O-succinylbenzoic acid--CoA ligase. | 0.452 |
| EEK14748.1 | EEK15688.1 | CAPGI0001_1265 | CAPGI0001_0895 | Putative DNA-directed RNA polymerase, omega subunit. | Identified by match to protein family HMM PF01569. | 0.430 |
| EEK14748.1 | rplF | CAPGI0001_1265 | CAPGI0001_0431 | Putative DNA-directed RNA polymerase, omega subunit. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.927 |
| EEK14972.1 | EEK15688.1 | CAPGI0001_1407 | CAPGI0001_0895 | Hypothetical protein. | Identified by match to protein family HMM PF01569. | 0.443 |
| EEK15547.1 | EEK15688.1 | CAPGI0001_0896 | CAPGI0001_0895 | Putative cyclase; Identified by match to protein family HMM PF04199. | Identified by match to protein family HMM PF01569. | 0.518 |
| EEK15688.1 | EEK13407.1 | CAPGI0001_0895 | CAPGI0001_2440 | Identified by match to protein family HMM PF01569. | Arylsulfatase; Identified by match to protein family HMM PF00884. | 0.547 |
| EEK15688.1 | EEK13484.1 | CAPGI0001_0895 | CAPGI0001_1908 | Identified by match to protein family HMM PF01569. | AMP-binding domain protein; Identified by match to protein family HMM PF00501. | 0.597 |
| EEK15688.1 | EEK13542.1 | CAPGI0001_0895 | CAPGI0001_1931 | Identified by match to protein family HMM PF01569. | O-succinylbenzoic acid--CoA ligase. | 0.597 |
| EEK15688.1 | EEK14748.1 | CAPGI0001_0895 | CAPGI0001_1265 | Identified by match to protein family HMM PF01569. | Putative DNA-directed RNA polymerase, omega subunit. | 0.430 |
| EEK15688.1 | EEK14972.1 | CAPGI0001_0895 | CAPGI0001_1407 | Identified by match to protein family HMM PF01569. | Hypothetical protein. | 0.443 |
| EEK15688.1 | EEK15547.1 | CAPGI0001_0895 | CAPGI0001_0896 | Identified by match to protein family HMM PF01569. | Putative cyclase; Identified by match to protein family HMM PF04199. | 0.518 |
| EEK15688.1 | asd | CAPGI0001_0895 | CAPGI0001_0894 | Identified by match to protein family HMM PF01569. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.536 |
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