Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK13893.1 | EEK13905.1 | CAPGI0001_1080 | CAPGI0001_1079 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.753 |
EEK13893.1 | EEK13919.1 | CAPGI0001_1080 | CAPGI0001_1078 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | Hypothetical protein; Identified by glimmer; putative. | 0.533 |
EEK13893.1 | EEK14538.1 | CAPGI0001_1080 | CAPGI0001_1613 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | LysM domain protein; Identified by match to protein family HMM PF01476. | 0.446 |
EEK13893.1 | EEK15341.1 | CAPGI0001_1080 | CAPGI0001_0631 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | Hypothetical protein; Identified by glimmer; putative. | 0.455 |
EEK13893.1 | nadK | CAPGI0001_1080 | CAPGI0001_1389 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.532 |
EEK13905.1 | EEK13893.1 | CAPGI0001_1079 | CAPGI0001_1080 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.753 |
EEK13905.1 | EEK13919.1 | CAPGI0001_1079 | CAPGI0001_1078 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.564 |
EEK13905.1 | EEK15341.1 | CAPGI0001_1079 | CAPGI0001_0631 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.505 |
EEK13919.1 | EEK13893.1 | CAPGI0001_1078 | CAPGI0001_1080 | Hypothetical protein; Identified by glimmer; putative. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.533 |
EEK13919.1 | EEK13905.1 | CAPGI0001_1078 | CAPGI0001_1079 | Hypothetical protein; Identified by glimmer; putative. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.564 |
EEK14538.1 | EEK13893.1 | CAPGI0001_1613 | CAPGI0001_1080 | LysM domain protein; Identified by match to protein family HMM PF01476. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.446 |
EEK14538.1 | EEK15341.1 | CAPGI0001_1613 | CAPGI0001_0631 | LysM domain protein; Identified by match to protein family HMM PF01476. | Hypothetical protein; Identified by glimmer; putative. | 0.548 |
EEK15341.1 | EEK13893.1 | CAPGI0001_0631 | CAPGI0001_1080 | Hypothetical protein; Identified by glimmer; putative. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.455 |
EEK15341.1 | EEK13905.1 | CAPGI0001_0631 | CAPGI0001_1079 | Hypothetical protein; Identified by glimmer; putative. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.505 |
EEK15341.1 | EEK14538.1 | CAPGI0001_0631 | CAPGI0001_1613 | Hypothetical protein; Identified by glimmer; putative. | LysM domain protein; Identified by match to protein family HMM PF01476. | 0.548 |
nadK | EEK13893.1 | CAPGI0001_1389 | CAPGI0001_1080 | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.532 |