STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK14731.1Phosphoribosylformylglycinamidine synthase family protein. (132 aa)    
Predicted Functional Partners:
EEK14788.1
N-6 DNA Methylase; Identified by match to protein family HMM PF01170; match to protein family HMM PF02384.
 
 0.954
EEK14715.1
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
 
     0.734
EEK14697.1
Helicase C-terminal domain protein; Identified by match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851.
 
 
 0.677
EEK13355.1
Hypothetical protein.
  
    0.620
EEK14673.1
Hypothetical protein.
  
    0.584
EEK15586.1
Divergent AAA domain protein; Identified by match to protein family HMM PF04326.
 
    0.495
aroA
Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.489
EEK14591.1
Divergent AAA domain protein; Identified by match to protein family HMM PF04326.
 
    0.488
EEK14387.1
Type I restriction enzyme HsdR protein N-terminal domain protein; Identified by match to protein family HMM PF04313.
  
 
 0.487
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.446
Your Current Organism:
Capnocytophaga gingivalis
NCBI taxonomy Id: 553178
Other names: C. gingivalis ATCC 33624, Capnocytophaga gingivalis ATCC 33624, Capnocytophaga gingivalis JCVIHMP016, Capnocytophaga gingivalis str. ATCC 33624, Capnocytophaga gingivalis strain ATCC 33624
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