Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEK13291.1 | EEK13465.1 | CAPGI0001_2434 | CAPGI0001_2433 | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | 0.929 |
| EEK13291.1 | EEK13742.1 | CAPGI0001_2434 | CAPGI0001_1482 | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | Hypothetical protein; Identified by glimmer; putative. | 0.765 |
| EEK13291.1 | EEK13787.1 | CAPGI0001_2434 | CAPGI0001_1481 | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.773 |
| EEK13291.1 | EEK14793.1 | CAPGI0001_2434 | CAPGI0001_1339 | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397. | 0.656 |
| EEK13438.1 | EEK13465.1 | CAPGI0001_2408 | CAPGI0001_2433 | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | 0.761 |
| EEK13438.1 | EEK13742.1 | CAPGI0001_2408 | CAPGI0001_1482 | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | Hypothetical protein; Identified by glimmer; putative. | 0.729 |
| EEK13438.1 | EEK13787.1 | CAPGI0001_2408 | CAPGI0001_1481 | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.758 |
| EEK13438.1 | EEK14793.1 | CAPGI0001_2408 | CAPGI0001_1339 | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397. | 0.483 |
| EEK13465.1 | EEK13291.1 | CAPGI0001_2433 | CAPGI0001_2434 | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | 0.929 |
| EEK13465.1 | EEK13438.1 | CAPGI0001_2433 | CAPGI0001_2408 | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | 0.761 |
| EEK13465.1 | EEK13742.1 | CAPGI0001_2433 | CAPGI0001_1482 | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | Hypothetical protein; Identified by glimmer; putative. | 0.722 |
| EEK13465.1 | EEK13787.1 | CAPGI0001_2433 | CAPGI0001_1481 | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.760 |
| EEK13465.1 | EEK14793.1 | CAPGI0001_2433 | CAPGI0001_1339 | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397. | 0.511 |
| EEK13493.1 | EEK14750.1 | CAPGI0001_1975 | CAPGI0001_1234 | Histidine kinase; Identified by match to protein family HMM PF06580. | Two component regulator propeller; Identified by glimmer; putative. | 0.688 |
| EEK13493.1 | EEK14793.1 | CAPGI0001_1975 | CAPGI0001_1339 | Histidine kinase; Identified by match to protein family HMM PF06580. | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397. | 0.538 |
| EEK13742.1 | EEK13291.1 | CAPGI0001_1482 | CAPGI0001_2434 | Hypothetical protein; Identified by glimmer; putative. | Bacteroidetes-specific putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM TIGR03519. | 0.765 |
| EEK13742.1 | EEK13438.1 | CAPGI0001_1482 | CAPGI0001_2408 | Hypothetical protein; Identified by glimmer; putative. | Bacteroidetes-specific putative membrane protein; Identified by match to protein family HMM TIGR03519. | 0.729 |
| EEK13742.1 | EEK13465.1 | CAPGI0001_1482 | CAPGI0001_2433 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF00691; match to protein family HMM PF07676. | 0.722 |
| EEK13742.1 | EEK13787.1 | CAPGI0001_1482 | CAPGI0001_1481 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.438 |
| EEK13742.1 | EEK14793.1 | CAPGI0001_1482 | CAPGI0001_1339 | Hypothetical protein; Identified by glimmer; putative. | LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397. | 0.538 |
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