Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK13406.1 | EEK13560.1 | CAPGI0001_2517 | CAPGI0001_1951 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | Hypothetical protein. | 0.478 |
EEK13406.1 | EEK14106.1 | CAPGI0001_2517 | CAPGI0001_0244 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | Hypothetical protein. | 0.664 |
EEK13406.1 | EEK14748.1 | CAPGI0001_2517 | CAPGI0001_1265 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | Putative DNA-directed RNA polymerase, omega subunit. | 0.727 |
EEK13406.1 | rpoA | CAPGI0001_2517 | CAPGI0001_0442 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.787 |
EEK13406.1 | rpoB | CAPGI0001_2517 | CAPGI0001_1148 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.857 |
EEK13406.1 | rpoC | CAPGI0001_2517 | CAPGI0001_0935 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.482 |
EEK13433.1 | EEK13560.1 | CAPGI0001_2549 | CAPGI0001_1951 | Hypothetical protein. | Hypothetical protein. | 0.578 |
EEK13560.1 | EEK13406.1 | CAPGI0001_1951 | CAPGI0001_2517 | Hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720. | 0.478 |
EEK13560.1 | EEK13433.1 | CAPGI0001_1951 | CAPGI0001_2549 | Hypothetical protein. | Hypothetical protein. | 0.578 |
EEK13560.1 | EEK13808.1 | CAPGI0001_1951 | CAPGI0001_1492 | Hypothetical protein. | Identified by match to protein family HMM PF03960; Belongs to the ArsC family. | 0.482 |
EEK13560.1 | EEK14106.1 | CAPGI0001_1951 | CAPGI0001_0244 | Hypothetical protein. | Hypothetical protein. | 0.613 |
EEK13560.1 | EEK14748.1 | CAPGI0001_1951 | CAPGI0001_1265 | Hypothetical protein. | Putative DNA-directed RNA polymerase, omega subunit. | 0.465 |
EEK13560.1 | ccoN | CAPGI0001_1951 | CAPGI0001_1576 | Hypothetical protein. | Cytochrome c oxidase, cbb3-type, subunit I; Identified by match to protein family HMM PF00115; match to protein family HMM PF02433; match to protein family HMM TIGR00780; match to protein family HMM TIGR00781; Belongs to the heme-copper respiratory oxidase family. | 0.478 |
EEK13560.1 | mgtE | CAPGI0001_1951 | CAPGI0001_1950 | Hypothetical protein. | Magnesium transporter; Acts as a magnesium transporter. | 0.753 |
EEK13560.1 | rpoA | CAPGI0001_1951 | CAPGI0001_0442 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.505 |
EEK13560.1 | rpoB | CAPGI0001_1951 | CAPGI0001_1148 | Hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.521 |
EEK13560.1 | rpoC | CAPGI0001_1951 | CAPGI0001_0935 | Hypothetical protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.488 |
EEK13808.1 | EEK13560.1 | CAPGI0001_1492 | CAPGI0001_1951 | Identified by match to protein family HMM PF03960; Belongs to the ArsC family. | Hypothetical protein. | 0.482 |
EEK13808.1 | EEK14748.1 | CAPGI0001_1492 | CAPGI0001_1265 | Identified by match to protein family HMM PF03960; Belongs to the ArsC family. | Putative DNA-directed RNA polymerase, omega subunit. | 0.466 |
EEK13808.1 | rpoA | CAPGI0001_1492 | CAPGI0001_0442 | Identified by match to protein family HMM PF03960; Belongs to the ArsC family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.572 |
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