Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK13488.1 | EEK13512.1 | CAPGI0001_1969 | CAPGI0001_1967 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
EEK13488.1 | EEK13520.1 | CAPGI0001_1969 | CAPGI0001_1917 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF08719; match to protein family HMM TIGR02464. | 0.858 |
EEK13488.1 | EEK13635.1 | CAPGI0001_1969 | CAPGI0001_2603 | Hypothetical protein; Identified by glimmer; putative. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00183; match to protein family HMM PF02518. | 0.749 |
EEK13488.1 | EEK14106.1 | CAPGI0001_1969 | CAPGI0001_0244 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.759 |
EEK13488.1 | EEK14669.1 | CAPGI0001_1969 | CAPGI0001_1199 | Hypothetical protein; Identified by glimmer; putative. | Histone deacetylase family; Identified by match to protein family HMM PF00850. | 0.781 |
EEK13488.1 | EEK14709.1 | CAPGI0001_1969 | CAPGI0001_1233 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.733 |
EEK13488.1 | EEK14932.1 | CAPGI0001_1969 | CAPGI0001_1360 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.729 |
EEK13488.1 | dnaN | CAPGI0001_1969 | CAPGI0001_2002 | Hypothetical protein; Identified by glimmer; putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.747 |
EEK13488.1 | ftsY | CAPGI0001_1969 | CAPGI0001_1968 | Hypothetical protein; Identified by glimmer; putative. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.773 |
EEK13488.1 | trmD | CAPGI0001_1969 | CAPGI0001_1970 | Hypothetical protein; Identified by glimmer; putative. | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.727 |
EEK13512.1 | EEK13488.1 | CAPGI0001_1967 | CAPGI0001_1969 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
EEK13512.1 | ftsY | CAPGI0001_1967 | CAPGI0001_1968 | Hypothetical protein; Identified by glimmer; putative. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.773 |
EEK13512.1 | trmD | CAPGI0001_1967 | CAPGI0001_1970 | Hypothetical protein; Identified by glimmer; putative. | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.727 |
EEK13520.1 | EEK13488.1 | CAPGI0001_1917 | CAPGI0001_1969 | Identified by match to protein family HMM PF08719; match to protein family HMM TIGR02464. | Hypothetical protein; Identified by glimmer; putative. | 0.858 |
EEK13635.1 | EEK13488.1 | CAPGI0001_2603 | CAPGI0001_1969 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00183; match to protein family HMM PF02518. | Hypothetical protein; Identified by glimmer; putative. | 0.749 |
EEK13635.1 | EEK14106.1 | CAPGI0001_2603 | CAPGI0001_0244 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00183; match to protein family HMM PF02518. | Hypothetical protein. | 0.850 |
EEK13635.1 | EEK14669.1 | CAPGI0001_2603 | CAPGI0001_1199 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00183; match to protein family HMM PF02518. | Histone deacetylase family; Identified by match to protein family HMM PF00850. | 0.821 |
EEK14106.1 | EEK13488.1 | CAPGI0001_0244 | CAPGI0001_1969 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.759 |
EEK14106.1 | EEK13635.1 | CAPGI0001_0244 | CAPGI0001_2603 | Hypothetical protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00183; match to protein family HMM PF02518. | 0.850 |
EEK14669.1 | EEK13488.1 | CAPGI0001_1199 | CAPGI0001_1969 | Histone deacetylase family; Identified by match to protein family HMM PF00850. | Hypothetical protein; Identified by glimmer; putative. | 0.781 |
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