| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEK13886.1 | EEK13965.1 | CAPGI0001_1029 | CAPGI0001_0247 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.765 |
| EEK13886.1 | EEK14020.1 | CAPGI0001_1029 | CAPGI0001_0248 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.765 |
| EEK13886.1 | EEK14374.1 | CAPGI0001_1029 | CAPGI0001_2019 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | DNA topoisomerase IV subunit B; Identified by match to protein family HMM PF00204; match to protein family HMM PF02518. | 0.968 |
| EEK13886.1 | gyrA | CAPGI0001_1029 | CAPGI0001_2004 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.642 |
| EEK13886.1 | gyrB | CAPGI0001_1029 | CAPGI0001_2578 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.926 |
| EEK13886.1 | metG | CAPGI0001_1029 | CAPGI0001_2344 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.708 |
| EEK13886.1 | rpoA | CAPGI0001_1029 | CAPGI0001_0442 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.505 |
| EEK13886.1 | secD | CAPGI0001_1029 | CAPGI0001_0239 | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.745 |
| EEK13965.1 | EEK13886.1 | CAPGI0001_0247 | CAPGI0001_1029 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | 0.765 |
| EEK13965.1 | EEK14020.1 | CAPGI0001_0247 | CAPGI0001_0248 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.994 |
| EEK13965.1 | gyrA | CAPGI0001_0247 | CAPGI0001_2004 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.765 |
| EEK14020.1 | EEK13886.1 | CAPGI0001_0248 | CAPGI0001_1029 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | 0.765 |
| EEK14020.1 | EEK13965.1 | CAPGI0001_0248 | CAPGI0001_0247 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.994 |
| EEK14020.1 | gyrA | CAPGI0001_0248 | CAPGI0001_2004 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.765 |
| EEK14282.1 | gyrA | CAPGI0001_2005 | CAPGI0001_2004 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.709 |
| EEK14374.1 | EEK13886.1 | CAPGI0001_2019 | CAPGI0001_1029 | DNA topoisomerase IV subunit B; Identified by match to protein family HMM PF00204; match to protein family HMM PF02518. | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | 0.968 |
| EEK14374.1 | gyrA | CAPGI0001_2019 | CAPGI0001_2004 | DNA topoisomerase IV subunit B; Identified by match to protein family HMM PF00204; match to protein family HMM PF02518. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.947 |
| EEK14374.1 | secD | CAPGI0001_2019 | CAPGI0001_0239 | DNA topoisomerase IV subunit B; Identified by match to protein family HMM PF00204; match to protein family HMM PF02518. | Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.474 |
| gyrA | EEK13886.1 | CAPGI0001_2004 | CAPGI0001_1029 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | DNA gyrase/topoisomerase IV, A subunit; Identified by match to protein family HMM PF00521. | 0.642 |
| gyrA | EEK13965.1 | CAPGI0001_2004 | CAPGI0001_0247 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.765 |
