STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK14430.1Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. (408 aa)    
Predicted Functional Partners:
glf
UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031.
 
  
 0.937
EEK14234.1
Nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
  
  
 0.918
EEK14339.1
Hypothetical protein.
 
  
 0.835
EEK14263.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321.
 
  
 0.817
EEK14341.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
  
 0.797
EEK14489.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
  
 0.793
EEK14422.1
Hypothetical protein.
 
    0.792
EEK14373.1
Hypothetical protein.
       0.758
EEK14425.1
Hypothetical protein.
       0.746
EEK14502.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
    0.742
Your Current Organism:
Capnocytophaga gingivalis
NCBI taxonomy Id: 553178
Other names: C. gingivalis ATCC 33624, Capnocytophaga gingivalis ATCC 33624, Capnocytophaga gingivalis JCVIHMP016, Capnocytophaga gingivalis str. ATCC 33624, Capnocytophaga gingivalis strain ATCC 33624
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