STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEK14372.1Acyltransferase; Identified by match to protein family HMM PF01553. (1180 aa)    
Predicted Functional Partners:
EEK15249.1
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase.
 
  
 0.850
EEK14916.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    0.845
EEK15492.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820.
 
   
 0.829
EEK14523.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
 
   
 0.823
EEK13641.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Identified by match to protein family HMM PF03417; match to protein family HMM PF07719.
 
     0.820
acpP-2
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 
 0.819
EEK15572.1
Putative acyl carrier protein.
 
 
 0.816
EEK15456.1
Hypothetical protein; Identified by glimmer; putative.
 
  
 0.811
EEK13333.1
Hypothetical protein; Identified by glimmer; putative.
 
  
 0.811
EEK15349.1
Hypothetical protein.
 
   
 0.810
Your Current Organism:
Capnocytophaga gingivalis
NCBI taxonomy Id: 553178
Other names: C. gingivalis ATCC 33624, Capnocytophaga gingivalis ATCC 33624, Capnocytophaga gingivalis JCVIHMP016, Capnocytophaga gingivalis str. ATCC 33624, Capnocytophaga gingivalis strain ATCC 33624
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