Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK13642.1 | EEK14661.1 | CAPGI0001_2637 | CAPGI0001_0082 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | Hypothetical protein. | 0.924 |
EEK13642.1 | EEK15349.1 | CAPGI0001_2637 | CAPGI0001_0633 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | Hypothetical protein. | 0.979 |
EEK13642.1 | fabD | CAPGI0001_2637 | CAPGI0001_2379 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | [acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.981 |
EEK13642.1 | fabG | CAPGI0001_2637 | CAPGI0001_1642 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.913 |
EEK13642.1 | fabZ | CAPGI0001_2637 | CAPGI0001_2393 | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.957 |
EEK14661.1 | EEK13642.1 | CAPGI0001_0082 | CAPGI0001_2637 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 0.924 |
EEK14661.1 | EEK15349.1 | CAPGI0001_0082 | CAPGI0001_0633 | Hypothetical protein. | Hypothetical protein. | 0.932 |
EEK14661.1 | EEK15825.1 | CAPGI0001_0082 | CAPGI0001_1807 | Hypothetical protein. | Putative enoyl-[acyl-carrier-protein] reductase II; Identified by match to protein family HMM PF03060. | 0.916 |
EEK14661.1 | accD | CAPGI0001_0082 | CAPGI0001_1040 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. | 0.735 |
EEK14661.1 | fabD | CAPGI0001_0082 | CAPGI0001_2379 | Hypothetical protein. | [acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.987 |
EEK14661.1 | fabG | CAPGI0001_0082 | CAPGI0001_1642 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.924 |
EEK14661.1 | fabZ | CAPGI0001_0082 | CAPGI0001_2393 | Hypothetical protein. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.958 |
EEK15349.1 | EEK13642.1 | CAPGI0001_0633 | CAPGI0001_2637 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 0.979 |
EEK15349.1 | EEK14661.1 | CAPGI0001_0633 | CAPGI0001_0082 | Hypothetical protein. | Hypothetical protein. | 0.932 |
EEK15349.1 | EEK15825.1 | CAPGI0001_0633 | CAPGI0001_1807 | Hypothetical protein. | Putative enoyl-[acyl-carrier-protein] reductase II; Identified by match to protein family HMM PF03060. | 0.919 |
EEK15349.1 | accD | CAPGI0001_0633 | CAPGI0001_1040 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. | 0.738 |
EEK15349.1 | fabD | CAPGI0001_0633 | CAPGI0001_2379 | Hypothetical protein. | [acyl-carrier-protein] S-malonyltransferase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. | 0.682 |
EEK15349.1 | fabG | CAPGI0001_0633 | CAPGI0001_1642 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.940 |
EEK15349.1 | fabZ | CAPGI0001_0633 | CAPGI0001_2393 | Hypothetical protein. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.915 |
EEK15349.1 | lpxA | CAPGI0001_0633 | CAPGI0001_2394 | Hypothetical protein. | acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.711 |
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