Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFM49430.1 | EFM49715.1 | HMPREF0299_7335 | HMPREF0299_7343 | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.440 |
EFM49430.1 | EFM50009.1 | HMPREF0299_7335 | HMPREF0299_5820 | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | Hypothetical protein. | 0.571 |
EFM49622.1 | EFM50009.1 | HMPREF0299_7550 | HMPREF0299_5820 | Hypothetical protein. | Hypothetical protein. | 0.702 |
EFM49715.1 | EFM49430.1 | HMPREF0299_7343 | HMPREF0299_7335 | Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.440 |
EFM49715.1 | EFM50009.1 | HMPREF0299_7343 | HMPREF0299_5820 | Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | Hypothetical protein. | 0.562 |
EFM49961.1 | EFM50009.1 | HMPREF0299_6240 | HMPREF0299_5820 | Nucleotidyl transferase; Identified by match to protein family HMM PF00132; match to protein family HMM PF00483. | Hypothetical protein. | 0.660 |
EFM49961.1 | glgB | HMPREF0299_6240 | HMPREF0299_5354 | Nucleotidyl transferase; Identified by match to protein family HMM PF00132; match to protein family HMM PF00483. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.474 |
EFM50009.1 | EFM49430.1 | HMPREF0299_5820 | HMPREF0299_7335 | Hypothetical protein. | Beta-ketoacyl synthase, N-terminal domain protein; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801. | 0.571 |
EFM50009.1 | EFM49622.1 | HMPREF0299_5820 | HMPREF0299_7550 | Hypothetical protein. | Hypothetical protein. | 0.702 |
EFM50009.1 | EFM49715.1 | HMPREF0299_5820 | HMPREF0299_7343 | Hypothetical protein. | Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.562 |
EFM50009.1 | EFM49961.1 | HMPREF0299_5820 | HMPREF0299_6240 | Hypothetical protein. | Nucleotidyl transferase; Identified by match to protein family HMM PF00132; match to protein family HMM PF00483. | 0.660 |
EFM50009.1 | EFM50086.1 | HMPREF0299_5820 | HMPREF0299_5821 | Hypothetical protein. | Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657; Belongs to the aspartokinase family. | 0.693 |
EFM50009.1 | EFM50099.1 | HMPREF0299_5820 | HMPREF0299_5708 | Hypothetical protein. | Hypothetical protein. | 0.621 |
EFM50009.1 | EFM50190.1 | HMPREF0299_5820 | HMPREF0299_5814 | Hypothetical protein. | Mur ligase middle domain protein; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353. | 0.715 |
EFM50009.1 | EFM50301.1 | HMPREF0299_5820 | HMPREF0299_5813 | Hypothetical protein. | Identified by match to protein family HMM PF07685. | 0.662 |
EFM50009.1 | asd | HMPREF0299_5820 | HMPREF0299_5822 | Hypothetical protein. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.622 |
EFM50009.1 | glgB | HMPREF0299_5820 | HMPREF0299_5354 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.702 |
EFM50086.1 | EFM50009.1 | HMPREF0299_5821 | HMPREF0299_5820 | Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657; Belongs to the aspartokinase family. | Hypothetical protein. | 0.693 |
EFM50086.1 | EFM50190.1 | HMPREF0299_5821 | HMPREF0299_5814 | Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657; Belongs to the aspartokinase family. | Mur ligase middle domain protein; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353. | 0.513 |
EFM50086.1 | asd | HMPREF0299_5821 | HMPREF0299_5822 | Aspartate kinase, monofunctional class; Identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.999 |
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