Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFM48435.1 | EFM48475.1 | HMPREF0299_6338 | HMPREF0299_6331 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | 0.682 |
| EFM48435.1 | EFM48771.1 | HMPREF0299_6338 | HMPREF0299_6330 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | Tetratricopeptide repeat protein. | 0.662 |
| EFM48435.1 | EFM48852.1 | HMPREF0299_6338 | HMPREF0299_6336 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | Hypothetical protein. | 0.803 |
| EFM48435.1 | EFM48956.1 | HMPREF0299_6338 | HMPREF0299_6337 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | Hypothetical protein. | 0.803 |
| EFM48435.1 | nadK | HMPREF0299_6338 | HMPREF0299_6334 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.849 |
| EFM48435.1 | recN | HMPREF0299_6338 | HMPREF0299_6335 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.830 |
| EFM48435.1 | rrmJ | HMPREF0299_6338 | HMPREF0299_6333 | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | Putative ribosomal RNA large subunit methyltransferase J; Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.790 |
| EFM48475.1 | EFM48435.1 | HMPREF0299_6331 | HMPREF0299_6338 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | 0.682 |
| EFM48475.1 | EFM48771.1 | HMPREF0299_6331 | HMPREF0299_6330 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Tetratricopeptide repeat protein. | 0.990 |
| EFM48475.1 | EFM48852.1 | HMPREF0299_6331 | HMPREF0299_6336 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Hypothetical protein. | 0.655 |
| EFM48475.1 | EFM48956.1 | HMPREF0299_6331 | HMPREF0299_6337 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Hypothetical protein. | 0.655 |
| EFM48475.1 | nadK | HMPREF0299_6331 | HMPREF0299_6334 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.808 |
| EFM48475.1 | recN | HMPREF0299_6331 | HMPREF0299_6335 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.795 |
| EFM48475.1 | rrmJ | HMPREF0299_6331 | HMPREF0299_6333 | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | Putative ribosomal RNA large subunit methyltransferase J; Identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478. | 0.688 |
| EFM48771.1 | EFM48435.1 | HMPREF0299_6330 | HMPREF0299_6338 | Tetratricopeptide repeat protein. | Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. | 0.662 |
| EFM48771.1 | EFM48475.1 | HMPREF0299_6330 | HMPREF0299_6331 | Tetratricopeptide repeat protein. | HAD hydrolase, family IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. | 0.990 |
| EFM48771.1 | EFM48852.1 | HMPREF0299_6330 | HMPREF0299_6336 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.655 |
| EFM48771.1 | EFM48956.1 | HMPREF0299_6330 | HMPREF0299_6337 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.655 |
| EFM48771.1 | nadK | HMPREF0299_6330 | HMPREF0299_6334 | Tetratricopeptide repeat protein. | NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.837 |
| EFM48771.1 | recN | HMPREF0299_6330 | HMPREF0299_6335 | Tetratricopeptide repeat protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.795 |
page 1 of 4