STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM48786.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
EFM47858.1
Hypothetical protein.
  
     0.587
EFM48589.1
Hypothetical protein.
 
    0.521
yajC
Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.
 
     0.514
EFM48107.1
Hypothetical protein.
  
     0.500
EFM49097.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
     0.498
EFM49724.1
Hypothetical protein.
  
     0.497
EFM50150.1
Hypothetical protein.
  
     0.483
EFM47884.1
Hypothetical protein.
  
     0.466
EFM47837.1
DivIVA domain protein.
  
     0.449
EFM48890.1
Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM PF08338; match to protein family HMM TIGR01777.
  
    0.425
Your Current Organism:
Corynebacterium matruchotii
NCBI taxonomy Id: 553207
Other names: C. matruchotii ATCC 14266, Corynebacterium matruchotii ATCC 14266, Corynebacterium matruchotii str. ATCC 14266, Corynebacterium matruchotii strain ATCC 14266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.