STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiXSirohydrochlorin cobaltochelatase; Identified by match to protein family HMM PF01903. (220 aa)    
Predicted Functional Partners:
EFM48010.1
Transcriptional regulator, PadR family; Identified by match to protein family HMM PF03551.
   
    0.942
EFM49670.1
Identified by match to protein family HMM PF01925.
     
 0.935
EFM49639.1
Nitrite/sulfite reductase ferredoxin domain protein; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.927
EFM49616.1
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.927
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.891
EFM49492.1
Hypothetical protein.
     
 0.891
cysD
Sulfate adenylyltransferase, small subunit; Identified by match to protein family HMM PF01507.
  
  
 0.850
cbiE
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469.
    
 0.837
cobI
Precorrin-2 C(20)-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467.
    
 0.814
cysN
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.791
Your Current Organism:
Corynebacterium matruchotii
NCBI taxonomy Id: 553207
Other names: C. matruchotii ATCC 14266, Corynebacterium matruchotii ATCC 14266, Corynebacterium matruchotii str. ATCC 14266, Corynebacterium matruchotii strain ATCC 14266
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