Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEF12606.1 | EEF13289.1 | CAMRE0001_2337 | CAMRE0001_2656 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein. | 0.732 |
EEF12606.1 | EEF13334.1 | CAMRE0001_2337 | CAMRE0001_2569 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | dUTP diphosphatase; Identified by match to protein family HMM PF08761. | 0.580 |
EEF12606.1 | EEF13396.1 | CAMRE0001_2337 | CAMRE0001_0438 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Thioredoxin domain protein. | 0.446 |
EEF12606.1 | EEF14146.1 | CAMRE0001_2337 | CAMRE0001_0621 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein. | 0.480 |
EEF12606.1 | EEF14646.1 | CAMRE0001_2337 | CAMRE0001_1306 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein; Belongs to the UPF0250 family. | 0.479 |
EEF12606.1 | EEF14965.1 | CAMRE0001_2337 | CAMRE0001_1640 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Identified by match to protein family HMM PF00034. | 0.622 |
EEF12606.1 | EEF15486.1 | CAMRE0001_2337 | CAMRE0001_0212 | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | Hypothetical protein. | 0.603 |
EEF13289.1 | EEF12606.1 | CAMRE0001_2656 | CAMRE0001_2337 | Hypothetical protein. | Prepilin-type cleavage/methylation N-terminal domain protein; Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532. | 0.732 |
EEF13289.1 | EEF13334.1 | CAMRE0001_2656 | CAMRE0001_2569 | Hypothetical protein. | dUTP diphosphatase; Identified by match to protein family HMM PF08761. | 0.669 |
EEF13289.1 | EEF13396.1 | CAMRE0001_2656 | CAMRE0001_0438 | Hypothetical protein. | Thioredoxin domain protein. | 0.711 |
EEF13289.1 | EEF14146.1 | CAMRE0001_2656 | CAMRE0001_0621 | Hypothetical protein. | Hypothetical protein. | 0.624 |
EEF13289.1 | EEF14646.1 | CAMRE0001_2656 | CAMRE0001_1306 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0250 family. | 0.716 |
EEF13289.1 | EEF14965.1 | CAMRE0001_2656 | CAMRE0001_1640 | Hypothetical protein. | Identified by match to protein family HMM PF00034. | 0.768 |
EEF13289.1 | EEF15486.1 | CAMRE0001_2656 | CAMRE0001_0212 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EEF13327.1 | EEF13333.1 | CAMRE0001_2567 | CAMRE0001_2568 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.565 |
EEF13327.1 | EEF13334.1 | CAMRE0001_2567 | CAMRE0001_2569 | Hypothetical protein. | dUTP diphosphatase; Identified by match to protein family HMM PF08761. | 0.607 |
EEF13327.1 | EEF13335.1 | CAMRE0001_2567 | CAMRE0001_2570 | Hypothetical protein. | Hypothetical protein. | 0.507 |
EEF13333.1 | EEF13327.1 | CAMRE0001_2568 | CAMRE0001_2567 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.565 |
EEF13333.1 | EEF13334.1 | CAMRE0001_2568 | CAMRE0001_2569 | Hypothetical protein; Identified by glimmer; putative. | dUTP diphosphatase; Identified by match to protein family HMM PF08761. | 0.773 |
EEF13333.1 | EEF13335.1 | CAMRE0001_2568 | CAMRE0001_2570 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.608 |
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