STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET80561.1Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (565 aa)    
Predicted Functional Partners:
EET80558.1
Hypothetical protein.
 
  
 0.964
EET80559.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.958
EET80562.1
Hypothetical protein.
 
   
 0.958
EET80565.1
Putative acyl carrier protein.
 
  
 0.958
EET80564.1
Putative acyl carrier protein; Identified by match to protein family HMM PF00550.
 
  
 0.957
EET80563.1
Hypothetical protein.
 
     0.956
EET80566.1
Acyltransferase; Identified by match to protein family HMM PF01553.
 
     0.956
EET80567.1
Hypothetical protein.
 
    0.956
EET80572.1
FabA-like domain protein; Identified by match to protein family HMM PF07977.
 
   
 0.942
EET80560.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; Identified by match to protein family HMM PF03061.
 
    0.941
Your Current Organism:
Campylobacter showae RM3277
NCBI taxonomy Id: 553219
Other names: C. showae RM3277, Campylobacter showae str. RM3277, Campylobacter showae strain RM3277
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