Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EET80177.1 | EET80178.1 | CAMSH0001_1893 | CAMSH0001_1894 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.791 |
EET80177.1 | EET80179.1 | CAMSH0001_1893 | CAMSH0001_1895 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.791 |
EET80177.1 | EET80180.1 | CAMSH0001_1893 | CAMSH0001_1896 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.791 |
EET80177.1 | EET80183.1 | CAMSH0001_1893 | CAMSH0001_1899 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.464 |
EET80177.1 | EET80184.1 | CAMSH0001_1893 | CAMSH0001_1900 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.454 |
EET80177.1 | EET80185.1 | CAMSH0001_1893 | CAMSH0001_1901 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.405 |
EET80177.1 | EET80186.1 | CAMSH0001_1893 | CAMSH0001_1902 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Hypothetical protein. | 0.456 |
EET80177.1 | rpmE | CAMSH0001_1893 | CAMSH0001_1898 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | Ribosomal protein L31; Binds the 23S rRNA. | 0.596 |
EET80177.1 | rsmI | CAMSH0001_1893 | CAMSH0001_1897 | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.596 |
EET80178.1 | EET80177.1 | CAMSH0001_1894 | CAMSH0001_1893 | Hypothetical protein. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.791 |
EET80178.1 | EET80179.1 | CAMSH0001_1894 | CAMSH0001_1895 | Hypothetical protein. | Hypothetical protein. | 0.796 |
EET80178.1 | EET80180.1 | CAMSH0001_1894 | CAMSH0001_1896 | Hypothetical protein. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.802 |
EET80178.1 | EET80183.1 | CAMSH0001_1894 | CAMSH0001_1899 | Hypothetical protein. | RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.443 |
EET80178.1 | EET80184.1 | CAMSH0001_1894 | CAMSH0001_1900 | Hypothetical protein. | Hypothetical protein. | 0.460 |
EET80178.1 | EET80185.1 | CAMSH0001_1894 | CAMSH0001_1901 | Hypothetical protein. | Hypothetical protein. | 0.407 |
EET80178.1 | EET80186.1 | CAMSH0001_1894 | CAMSH0001_1902 | Hypothetical protein. | Hypothetical protein. | 0.428 |
EET80178.1 | rpmE | CAMSH0001_1894 | CAMSH0001_1898 | Hypothetical protein. | Ribosomal protein L31; Binds the 23S rRNA. | 0.600 |
EET80178.1 | rsmI | CAMSH0001_1894 | CAMSH0001_1897 | Hypothetical protein. | S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.600 |
EET80179.1 | EET80177.1 | CAMSH0001_1895 | CAMSH0001_1893 | Hypothetical protein. | Aminotransferase, class I/II; Identified by match to protein family HMM PF00155. | 0.791 |
EET80179.1 | EET80178.1 | CAMSH0001_1895 | CAMSH0001_1894 | Hypothetical protein. | Hypothetical protein. | 0.796 |
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