STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANO33006.1Heat-shock protein HslJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
ANO32280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0253 family.
  
     0.611
ANO33005.1
Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
ANO34796.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
ANO33753.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
ANO34182.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
 
  
 0.452
ANO33386.1
Maltoporin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.411
ANO32331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
 
  
 0.404
Your Current Organism:
Vibrio breoganii
NCBI taxonomy Id: 553239
Other names: CECT 7222, LMG 23858, LMG:23858, V. breoganii, Vibrio breoganii Beaz Hidalgo et al. 2009, Vibrio sp. C 5.5, Vibrio sp. CECT 7222, Vibrio sp. CMJ 13.7, Vibrio sp. LMG 23858, Vibrio sp. LMG 24484, Vibrio sp. VB 16.3, strain RD 15.11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.