STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ05760.1Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). (156 aa)    
Predicted Functional Partners:
SDQ10154.1
Asparagine synthase (glutamine-hydrolysing).
  
  
  0.539
SDQ55289.1
Protein of unknown function.
  
     0.522
SDQ10191.1
Asparagine synthase (glutamine-hydrolysing).
  
  
  0.514
SDQ19809.1
Transcriptional regulator, CdaR family.
  
     0.464
SDQ92410.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
  
   
 0.464
SDQ10270.1
Transglutaminase-like superfamily protein.
  
     0.452
SDQ66968.1
DoxX-like family protein.
  
     0.448
SDQ10231.1
Hypothetical protein.
  
     0.429
sspH-2
Small acid-soluble spore protein H (minor); Belongs to the SspH family.
 
     0.422
SDR04359.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.421
Your Current Organism:
Virgibacillus salinus
NCBI taxonomy Id: 553311
Other names: CCM 7562, CECT 7439, DSM 21756, V. salinus, Virgibacillus salinus Carrasco et al. 2009, Virgibacillus sp. XH22, strain XH-22, strain XH22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.