STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ20877.13-hexulose-6-phosphate synthase. (205 aa)    
Predicted Functional Partners:
SDQ20901.1
3-hexulose-6-phosphate isomerase.
 
 0.999
SDQ20856.1
2-dehydro-3-deoxygluconokinase.
 
    0.838
SDQ20834.1
Transcriptional regulator, LacI family.
 
   
 0.806
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.797
SDQ20922.1
Ureidoglycolate dehydrogenase (NAD+); Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.768
SDQ61831.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.721
SDQ43198.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily; Belongs to the UPF0173 family.
    
 0.699
SDQ16272.1
Transcriptional antiterminator, BglG family.
  
 
 0.670
SDQ17115.1
Lichenan operon transcriptional antiterminator.
  
 
 0.670
SDQ05643.1
Sugar phosphate isomerase/epimerase.
  
 
  0.595
Your Current Organism:
Virgibacillus salinus
NCBI taxonomy Id: 553311
Other names: CCM 7562, CECT 7439, DSM 21756, V. salinus, Virgibacillus salinus Carrasco et al. 2009, Virgibacillus sp. XH22, strain XH-22, strain XH22
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