STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ26337.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SDQ26314.1
Signal transduction histidine kinase.
 
     0.933
SDQ26294.1
Response regulator of citrate/malate metabolism.
 
     0.911
SDQ06096.1
TolB protein.
  
     0.672
SDQ26358.1
Peptide/nickel transport system permease protein.
       0.558
SDQ18103.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
     0.549
SDQ57535.1
Cytochrome c oxidase assembly protein subunit 15.
  
     0.548
SDQ18085.1
Uncharacterized membrane protein YfhO.
  
     0.537
SDQ26402.1
Peptide/nickel transport system substrate-binding protein.
 
     0.519
SDQ09184.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.514
SDQ77475.1
MFS-type transporter involved in bile tolerance, Atg22 family.
  
     0.513
Your Current Organism:
Virgibacillus salinus
NCBI taxonomy Id: 553311
Other names: CCM 7562, CECT 7439, DSM 21756, V. salinus, Virgibacillus salinus Carrasco et al. 2009, Virgibacillus sp. XH22, strain XH-22, strain XH22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.