Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ04566.1 | SDQ09028.1 | SAMN05216231_0068 | SAMN05216231_0365 | acetyl-CoA synthetase. | succinyl-CoA:acetate CoA-transferase. | 0.926 |
SDQ04566.1 | SDQ18331.1 | SAMN05216231_0068 | SAMN05216231_0839 | acetyl-CoA synthetase. | 3-hydroxyisobutyrate dehydrogenase. | 0.883 |
SDQ04566.1 | SDQ52353.1 | SAMN05216231_0068 | SAMN05216231_1796 | acetyl-CoA synthetase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.932 |
SDQ04566.1 | SDR09546.1 | SAMN05216231_0068 | SAMN05216231_3568 | acetyl-CoA synthetase. | acetyl-CoA synthetase. | 0.915 |
SDQ04566.1 | ackA | SAMN05216231_0068 | SAMN05216231_1444 | acetyl-CoA synthetase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.932 |
SDQ04566.1 | rocA | SAMN05216231_0068 | SAMN05216231_3661 | acetyl-CoA synthetase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.553 |
SDQ05775.1 | SDQ52353.1 | SAMN05216231_0160 | SAMN05216231_1796 | Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.896 |
SDQ05775.1 | SDQ53917.1 | SAMN05216231_0160 | SAMN05216231_1851 | Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate dehydrogenase (NAD); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.918 |
SDQ05775.1 | rocA | SAMN05216231_0160 | SAMN05216231_3661 | Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.910 |
SDQ09028.1 | SDQ04566.1 | SAMN05216231_0365 | SAMN05216231_0068 | succinyl-CoA:acetate CoA-transferase. | acetyl-CoA synthetase. | 0.926 |
SDQ09028.1 | SDQ52353.1 | SAMN05216231_0365 | SAMN05216231_1796 | succinyl-CoA:acetate CoA-transferase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.901 |
SDQ09028.1 | SDR09546.1 | SAMN05216231_0365 | SAMN05216231_3568 | succinyl-CoA:acetate CoA-transferase. | acetyl-CoA synthetase. | 0.933 |
SDQ09028.1 | ackA | SAMN05216231_0365 | SAMN05216231_1444 | succinyl-CoA:acetate CoA-transferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.917 |
SDQ18331.1 | SDQ04566.1 | SAMN05216231_0839 | SAMN05216231_0068 | 3-hydroxyisobutyrate dehydrogenase. | acetyl-CoA synthetase. | 0.883 |
SDQ18331.1 | SDQ52353.1 | SAMN05216231_0839 | SAMN05216231_1796 | 3-hydroxyisobutyrate dehydrogenase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.912 |
SDQ18331.1 | SDR01169.1 | SAMN05216231_0839 | SAMN05216231_3254 | 3-hydroxyisobutyrate dehydrogenase. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.649 |
SDQ18331.1 | SDR09546.1 | SAMN05216231_0839 | SAMN05216231_3568 | 3-hydroxyisobutyrate dehydrogenase. | acetyl-CoA synthetase. | 0.891 |
SDQ18331.1 | ackA | SAMN05216231_0839 | SAMN05216231_1444 | 3-hydroxyisobutyrate dehydrogenase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.479 |
SDQ18331.1 | rocA | SAMN05216231_0839 | SAMN05216231_3661 | 3-hydroxyisobutyrate dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. RocA subfamily. | 0.480 |
SDQ52353.1 | SDQ04566.1 | SAMN05216231_1796 | SAMN05216231_0068 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | acetyl-CoA synthetase. | 0.932 |
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