Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ09371.1 | SDQ27695.1 | SAMN05216231_0383 | SAMN05216231_1279 | Glutamate synthase (NADH) large subunit. | 3-hydroxyacyl-CoA dehydrogenase. | 0.411 |
SDQ09371.1 | SDQ56819.1 | SAMN05216231_0383 | SAMN05216231_1972 | Glutamate synthase (NADH) large subunit. | GNAT acetyltransferase. | 0.728 |
SDQ09371.1 | SDQ79325.1 | SAMN05216231_0383 | SAMN05216231_2549 | Glutamate synthase (NADH) large subunit. | Aminoglycoside 6'-N-acetyltransferase. | 0.729 |
SDQ09371.1 | SDQ93794.1 | SAMN05216231_0383 | SAMN05216231_3117 | Glutamate synthase (NADH) large subunit. | Protein N-acetyltransferase, RimJ/RimL family. | 0.728 |
SDQ09371.1 | guaB | SAMN05216231_0383 | SAMN05216231_0081 | Glutamate synthase (NADH) large subunit. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.874 |
SDQ27695.1 | SDQ09371.1 | SAMN05216231_1279 | SAMN05216231_0383 | 3-hydroxyacyl-CoA dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.411 |
SDQ27695.1 | SDQ79325.1 | SAMN05216231_1279 | SAMN05216231_2549 | 3-hydroxyacyl-CoA dehydrogenase. | Aminoglycoside 6'-N-acetyltransferase. | 0.832 |
SDQ27695.1 | SDQ84125.1 | SAMN05216231_1279 | SAMN05216231_2740 | 3-hydroxyacyl-CoA dehydrogenase. | NADPH:quinone reductase. | 0.811 |
SDQ56819.1 | SDQ09371.1 | SAMN05216231_1972 | SAMN05216231_0383 | GNAT acetyltransferase. | Glutamate synthase (NADH) large subunit. | 0.728 |
SDQ56819.1 | SDQ79325.1 | SAMN05216231_1972 | SAMN05216231_2549 | GNAT acetyltransferase. | Aminoglycoside 6'-N-acetyltransferase. | 0.630 |
SDQ56819.1 | guaB | SAMN05216231_1972 | SAMN05216231_0081 | GNAT acetyltransferase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.680 |
SDQ79261.1 | SDQ79294.1 | SAMN05216231_2547 | SAMN05216231_2548 | Nucleotidyltransferase domain-containing protein. | Catechol 2,3-dioxygenase. | 0.603 |
SDQ79261.1 | SDQ79325.1 | SAMN05216231_2547 | SAMN05216231_2549 | Nucleotidyltransferase domain-containing protein. | Aminoglycoside 6'-N-acetyltransferase. | 0.575 |
SDQ79261.1 | SDQ79347.1 | SAMN05216231_2547 | SAMN05216231_2550 | Nucleotidyltransferase domain-containing protein. | Putative zincin peptidase. | 0.420 |
SDQ79261.1 | SDQ79376.1 | SAMN05216231_2547 | SAMN05216231_2551 | Nucleotidyltransferase domain-containing protein. | Maltose O-acetyltransferase. | 0.429 |
SDQ79294.1 | SDQ79261.1 | SAMN05216231_2548 | SAMN05216231_2547 | Catechol 2,3-dioxygenase. | Nucleotidyltransferase domain-containing protein. | 0.603 |
SDQ79294.1 | SDQ79325.1 | SAMN05216231_2548 | SAMN05216231_2549 | Catechol 2,3-dioxygenase. | Aminoglycoside 6'-N-acetyltransferase. | 0.714 |
SDQ79294.1 | SDQ79347.1 | SAMN05216231_2548 | SAMN05216231_2550 | Catechol 2,3-dioxygenase. | Putative zincin peptidase. | 0.685 |
SDQ79294.1 | SDQ79376.1 | SAMN05216231_2548 | SAMN05216231_2551 | Catechol 2,3-dioxygenase. | Maltose O-acetyltransferase. | 0.626 |
SDQ79325.1 | SDQ09371.1 | SAMN05216231_2549 | SAMN05216231_0383 | Aminoglycoside 6'-N-acetyltransferase. | Glutamate synthase (NADH) large subunit. | 0.729 |
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