STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000591415_01067Unannotated protein. (83 aa)    
Predicted Functional Partners:
FQP86_02350
Unannotated protein.
  
 
 0.964
mlaD
Unannotated protein.
  
 0.963
FQP86_02355
Unannotated protein.
      0.915
FQP86_02370
Unannotated protein.
  
 
 0.908
mlaE
Unannotated protein.
  
 
 0.907
FQP86_02345
Unannotated protein; Belongs to the BolA/IbaG family.
       0.461
murA
Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.455
FQP86_02795
Unannotated protein.
    
  0.437
FQP86_02805
Unannotated protein.
   
 
 0.432
lolD
Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
     
 0.431
Your Current Organism:
Cobetia crustatorum
NCBI taxonomy Id: 553385
Other names: C. crustatorum, Cobetia crustatorum Kim et al. 2010, Cobetia sp. JO1, JCM 15644, KCTC 22486, strain JO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.