STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpdAUnannotated protein. (479 aa)    
Predicted Functional Partners:
odhB
Unannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 0.996
FQP86_02970
Unannotated protein.
 
 0.988
FQP86_11475
Unannotated protein.
 
 0.985
FQP86_11470
Unannotated protein.
 0.981
aceF
Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.978
FQP86_11480
Unannotated protein.
 
 
 0.972
GCA_000591415_00449
Unannotated protein.
 0.961
GCA_000591415_01649
Unannotated protein.
    
 0.917
gltB
Unannotated protein.
    
 0.917
gcvT
Unannotated protein.
 
 0.906
Your Current Organism:
Cobetia crustatorum
NCBI taxonomy Id: 553385
Other names: C. crustatorum, Cobetia crustatorum Kim et al. 2010, Cobetia sp. JO1, JCM 15644, KCTC 22486, strain JO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.