STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FQP86_06845Unannotated protein. (444 aa)    
Predicted Functional Partners:
FQP86_03270
Unannotated protein; Belongs to the GcvT family.
  
 0.958
GCA_000591415_01649
Unannotated protein.
    
 0.796
gltB
Unannotated protein.
    
 0.796
FQP86_09125
Unannotated protein.
  
  
 
0.768
GCA_000591415_02709
Unannotated protein.
  
  
 
0.720
dadA
Unannotated protein; Oxidative deamination of D-amino acids.
  
  
 
0.676
FQP86_03275
Unannotated protein.
  
 0.644
alr
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.576
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.560
hppD
Unannotated protein.
   
 
  0.560
Your Current Organism:
Cobetia crustatorum
NCBI taxonomy Id: 553385
Other names: C. crustatorum, Cobetia crustatorum Kim et al. 2010, Cobetia sp. JO1, JCM 15644, KCTC 22486, strain JO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.