STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBUnannotated protein; Belongs to the pseudomonas-type ThrB family. (320 aa)    
Predicted Functional Partners:
FQP86_17100
Unannotated protein.
 
  
 0.949
FQP86_17095
Unannotated protein.
    
 0.945
FQP86_04245
Unannotated protein.
     
 0.879
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.877
FQP86_10755
Unannotated protein.
    
  0.874
FQP86_04510
Unannotated protein.
  
    0.728
GCA_000591415_03024
Unannotated protein.
   
 
  0.721
FQP86_17230
Unannotated protein.
   
 
  0.721
metW
Unannotated protein.
  
     0.629
speA
Unannotated protein; Catalyzes the biosynthesis of agmatine from arginine.
       0.558
Your Current Organism:
Cobetia crustatorum
NCBI taxonomy Id: 553385
Other names: C. crustatorum, Cobetia crustatorum Kim et al. 2010, Cobetia sp. JO1, JCM 15644, KCTC 22486, strain JO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.