STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK64970.1Uncharacterized membrane protein. (353 aa)    
Predicted Functional Partners:
SFK65091.1
Protein of unknown function.
 
    0.723
SFK64910.1
PGF-pre-PGF domain-containing protein; Manually curated.
  
   
 0.651
SFK83350.1
Hypothetical protein.
  
     0.609
SFK65004.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.602
SFL08663.1
RecJ-like exonuclease.
  
     0.592
SFL22982.1
ACT domain-containing protein.
  
     0.582
SFL22576.1
Uncharacterized Zn-finger protein.
  
     0.576
SFL40662.1
Dolichol kinase.
  
     0.570
SFL08161.1
Flagellar protein FlaJ.
  
     0.568
SFL39572.1
KEOPS complex subunit Cgi121.
  
     0.568
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.