STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK65442.1Glycosyltransferase involved in cell wall bisynthesis. (408 aa)    
Predicted Functional Partners:
SFK65405.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.890
SFK65424.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.800
SFK65373.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.641
SFK71190.1
UDPglucose 6-dehydrogenase.
 
 
 0.595
SFK65324.1
UDP-glucose 4-epimerase.
  
 
  0.591
SFL65336.1
UDP-glucose 4-epimerase.
  
 
  0.587
SFK69419.1
Glucose-1-phosphate thymidylyltransferase.
  
  0.586
SFL59544.1
UDP-glucose 4-epimerase.
  
 
  0.584
SFK69400.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.578
SFK70464.1
Glucose-1-phosphate thymidylyltransferase.
  
  0.577
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
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