STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK67984.1alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase. (398 aa)    
Predicted Functional Partners:
SFK67896.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
  
  0.984
SFK67915.1
alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase.
 
  
  0.984
SFK67882.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
  
  0.983
SFK67860.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG.
 
  
  0.981
SFK67960.1
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
  
  0.968
SFK67940.1
Putative phosphonate transport system ATP-binding protein.
 
     0.944
SFK68010.1
Sugar phosphate isomerase/epimerase.
       0.784
SFK67803.1
Phosphonate transport system permease protein.
 
     0.737
SFK67779.1
Hypothetical protein.
 
     0.717
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     0.700
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
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