STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK70835.1Glycosyltransferase involved in cell wall bisynthesis. (354 aa)    
Predicted Functional Partners:
SFK70858.1
Polysaccharide transporter, PST family.
 
    0.739
SFK69400.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.596
SFK70745.1
Glycosyl transferase family 2.
 
 
  0.585
SFL55206.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.585
SFK83709.1
Glycosyl transferase family 2.
  
 
  0.581
SFK70883.1
Glycosyltransferase, GT2 family.
 
 
  0.571
SFL31805.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
  
 0.565
SFK70440.1
Lipopolysaccharide exporter.
  
    0.564
SFL54082.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.556
SFK71190.1
UDPglucose 6-dehydrogenase.
 
 
 0.544
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.