STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK84651.1Acyl dehydratase. (127 aa)    
Predicted Functional Partners:
SFL38031.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 
 0.784
SFK69157.1
Hypothetical protein.
  
  0.651
SFL03874.1
Hypothetical protein.
  
  0.651
SFL08495.1
Hypothetical protein.
  
  0.651
SFK60446.1
Long-chain acyl-CoA synthetase.
  
 
 0.621
SFK84792.1
beta-methylmalyl-CoA/(S)-malyl-CoA lyase.
 
 
 0.616
SFK60522.1
acetyl-CoA acyltransferase.
  
 0.588
SFK69176.1
acetyl-CoA C-acetyltransferase.
  
 0.588
SFK71627.1
acetyl-CoA C-acetyltransferase.
  
 0.588
SFL03888.1
acetyl-CoA C-acetyltransferase.
  
 0.588
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.