STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL10750.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
SFL10763.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
 
     0.783
SFL10737.1
Protein-disulfide isomerase.
       0.615
SFL07341.1
Cupin domain-containing protein.
  
     0.563
SFL58814.1
Protein of unknown function.
  
     0.521
SFK64609.1
Protein of unknown function.
  
     0.506
SFK87551.1
Endonuclease YncB, thermonuclease family.
  
     0.479
SFK76221.1
Hypothetical protein.
  
     0.476
SFL48871.1
Predicted PurR-regulated permease PerM.
  
     0.468
SFL64035.1
Site-specific recombinase XerD.
  
     0.461
SFK79384.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Halogranum rubrum
NCBI taxonomy Id: 553466
Other names: CGMCC 1.7738, H. rubrum, Halobacteriaceae archaeon RO2-11, Halogranum rubrum Cui et al. 2010, JCM 15772, strain RO2-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.