Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL25102.1 | SFL25121.1 | SAMN04487950_3049 | SAMN04487950_3050 | Inorganic phosphate transporter, PiT family. | Hypothetical protein. | 0.773 |
SFL25102.1 | SFL25143.1 | SAMN04487950_3049 | SAMN04487950_3051 | Inorganic phosphate transporter, PiT family. | Hypothetical protein; Partial gene; manually curated. | 0.446 |
SFL25102.1 | pyrE | SAMN04487950_3049 | SAMN04487950_3048 | Inorganic phosphate transporter, PiT family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.481 |
SFL25121.1 | SFL25102.1 | SAMN04487950_3050 | SAMN04487950_3049 | Hypothetical protein. | Inorganic phosphate transporter, PiT family. | 0.773 |
SFL25121.1 | pyrE | SAMN04487950_3050 | SAMN04487950_3048 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.411 |
SFL25143.1 | SFL25102.1 | SAMN04487950_3051 | SAMN04487950_3049 | Hypothetical protein; Partial gene; manually curated. | Inorganic phosphate transporter, PiT family. | 0.446 |
pyrE | SFL25102.1 | SAMN04487950_3048 | SAMN04487950_3049 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Inorganic phosphate transporter, PiT family. | 0.481 |
pyrE | SFL25121.1 | SAMN04487950_3048 | SAMN04487950_3050 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Hypothetical protein. | 0.411 |