Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL22932.1 | SFL61850.1 | SAMN04487950_2928 | SAMN04487950_4402 | Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. | Hypothetical protein. | 0.416 |
SFL61689.1 | SFL61713.1 | SAMN04487950_4395 | SAMN04487950_4396 | Acetolactate synthase, large subunit. | Acetolactate synthase, small subunit. | 0.999 |
SFL61689.1 | SFL61763.1 | SAMN04487950_4395 | SAMN04487950_4398 | Acetolactate synthase, large subunit. | Hypothetical protein. | 0.809 |
SFL61689.1 | SFL61804.1 | SAMN04487950_4395 | SAMN04487950_4400 | Acetolactate synthase, large subunit. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit. | 0.909 |
SFL61689.1 | SFL61831.1 | SAMN04487950_4395 | SAMN04487950_4401 | Acetolactate synthase, large subunit. | 3-isopropylmalate dehydrogenase. | 0.956 |
SFL61689.1 | SFL61850.1 | SAMN04487950_4395 | SAMN04487950_4402 | Acetolactate synthase, large subunit. | Hypothetical protein. | 0.425 |
SFL61689.1 | ilvC | SAMN04487950_4395 | SAMN04487950_4397 | Acetolactate synthase, large subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.994 |
SFL61689.1 | leuC-2 | SAMN04487950_4395 | SAMN04487950_4399 | Acetolactate synthase, large subunit. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.941 |
SFL61713.1 | SFL61689.1 | SAMN04487950_4396 | SAMN04487950_4395 | Acetolactate synthase, small subunit. | Acetolactate synthase, large subunit. | 0.999 |
SFL61713.1 | SFL61763.1 | SAMN04487950_4396 | SAMN04487950_4398 | Acetolactate synthase, small subunit. | Hypothetical protein. | 0.810 |
SFL61713.1 | SFL61804.1 | SAMN04487950_4396 | SAMN04487950_4400 | Acetolactate synthase, small subunit. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit. | 0.966 |
SFL61713.1 | SFL61831.1 | SAMN04487950_4396 | SAMN04487950_4401 | Acetolactate synthase, small subunit. | 3-isopropylmalate dehydrogenase. | 0.995 |
SFL61713.1 | SFL61850.1 | SAMN04487950_4396 | SAMN04487950_4402 | Acetolactate synthase, small subunit. | Hypothetical protein. | 0.425 |
SFL61713.1 | ilvC | SAMN04487950_4396 | SAMN04487950_4397 | Acetolactate synthase, small subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.999 |
SFL61713.1 | leuC-2 | SAMN04487950_4396 | SAMN04487950_4399 | Acetolactate synthase, small subunit. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.973 |
SFL61763.1 | SFL61689.1 | SAMN04487950_4398 | SAMN04487950_4395 | Hypothetical protein. | Acetolactate synthase, large subunit. | 0.809 |
SFL61763.1 | SFL61713.1 | SAMN04487950_4398 | SAMN04487950_4396 | Hypothetical protein. | Acetolactate synthase, small subunit. | 0.810 |
SFL61763.1 | SFL61804.1 | SAMN04487950_4398 | SAMN04487950_4400 | Hypothetical protein. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit. | 0.663 |
SFL61763.1 | SFL61831.1 | SAMN04487950_4398 | SAMN04487950_4401 | Hypothetical protein. | 3-isopropylmalate dehydrogenase. | 0.663 |
SFL61763.1 | SFL61850.1 | SAMN04487950_4398 | SAMN04487950_4402 | Hypothetical protein. | Hypothetical protein. | 0.425 |
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