node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG62276.1 | rpoD | SAMN04488063_2616 | SAMN04488063_1833 | DNA-directed RNA polymerase, subunit E'. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.997 |
SFG62276.1 | rpoH | SAMN04488063_2616 | SAMN04488063_0449 | DNA-directed RNA polymerase, subunit E'. | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.998 |
SFG62276.1 | rpoK | SAMN04488063_2616 | SAMN04488063_1839 | DNA-directed RNA polymerase, subunit E'. | DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.997 |
SFG62276.1 | rpoN | SAMN04488063_2616 | SAMN04488063_1838 | DNA-directed RNA polymerase, subunit E'. | DNA-directed RNA polymerase, subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.997 |
SFG62276.1 | rpoP | SAMN04488063_2616 | SAMN04488063_0717 | DNA-directed RNA polymerase, subunit E'. | DNA-directed RNA polymerase, subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.997 |
SFG62276.1 | tbp | SAMN04488063_2616 | SAMN04488063_0287 | DNA-directed RNA polymerase, subunit E'. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.896 |
SFG62276.1 | tfb-2 | SAMN04488063_2616 | SAMN04488063_0801 | DNA-directed RNA polymerase, subunit E'. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.414 |
SFG62276.1 | tfb-5 | SAMN04488063_2616 | SAMN04488063_1613 | DNA-directed RNA polymerase, subunit E'. | Transcription initiation factor TFIIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.402 |
SFG62276.1 | tfe | SAMN04488063_2616 | SAMN04488063_1287 | DNA-directed RNA polymerase, subunit E'. | Transcription initiation factor TFIIE subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.875 |
rpl40e | rpoD | SAMN04488063_0533 | SAMN04488063_1833 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.948 |
rpl40e | rpoH | SAMN04488063_0533 | SAMN04488063_0449 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.955 |
rpl40e | rpoK | SAMN04488063_0533 | SAMN04488063_1839 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.963 |
rpl40e | rpoN | SAMN04488063_0533 | SAMN04488063_1838 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | DNA-directed RNA polymerase, subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.959 |
rpl40e | rpoP | SAMN04488063_0533 | SAMN04488063_0717 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | DNA-directed RNA polymerase, subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.990 |
rpl40e | tbp | SAMN04488063_0533 | SAMN04488063_0287 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.946 |
rpl40e | tfb-2 | SAMN04488063_0533 | SAMN04488063_0801 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.496 |
rpl40e | tfb-5 | SAMN04488063_0533 | SAMN04488063_1613 | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | Transcription initiation factor TFIIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.460 |
rpoD | SFG62276.1 | SAMN04488063_1833 | SAMN04488063_2616 | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | DNA-directed RNA polymerase, subunit E'. | 0.997 |
rpoD | rpl40e | SAMN04488063_1833 | SAMN04488063_0533 | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | Large subunit ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.948 |
rpoD | rpoH | SAMN04488063_1833 | SAMN04488063_0449 | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.998 |