STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF84261.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (246 aa)    
Predicted Functional Partners:
SFH06255.1
NADH-quinone oxidoreductase subunit C/D.
   
   0.837
SFG03168.1
NADH dehydrogenase subunit C.
   
   0.837
SFG73606.1
NADH dehydrogenase subunit C.
   
   0.837
SFG71271.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
 
0.797
SFF94269.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.765
SFG43993.1
hydroxymethylglutaryl-CoA synthase.
   
 
  0.734
SFF86017.1
3-hydroxybutyrate dehydrogenase.
  
  
  0.650
SFF84290.1
Nucleotide-binding universal stress protein, UspA family.
  
    0.533
SFG51114.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
  
 
0.532
SFG16706.1
1-phosphofructokinase.
   
 
  0.492
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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