STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF92859.1Thiosulfate dehydrogenase [quinone] large subunit. (178 aa)    
Predicted Functional Partners:
SFG04282.1
Hypothetical protein.
  
     0.643
SFG52608.1
Hypothetical protein.
  
     0.577
SFF75559.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
 
  0.562
SFG64022.1
Thiosulfate dehydrogenase [quinone] large subunit.
  
  
 
0.544
SFF89567.1
Flagellar protein FlaJ.
  
     0.536
SFF75585.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
   
 
  0.504
SFG06959.1
Flagella accessory protein C (FlaC).
  
     0.482
SFG79573.1
Thiol-disulfide isomerase or thioredoxin.
  
   0.481
SFF92884.1
Hypothetical protein.
       0.475
SFF80955.1
Helix-turn-helix domain-containing protein.
  
     0.462
Your Current Organism:
Halopelagius inordinatus
NCBI taxonomy Id: 553467
Other names: CGMCC 1.7739, H. inordinatus, Halobacteriaceae archaeon RO5-14, Halobacteriaceae archaeon RO5-2, Halopelagius inordinatus Cui et al. 2010, JCM 15773, strain RO5-2
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