Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF75559.1 | SFF75585.1 | SAMN04488063_0149 | SAMN04488063_0150 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.896 |
SFF75559.1 | SFF92859.1 | SAMN04488063_0149 | SAMN04488063_0830 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.562 |
SFF75559.1 | SFG64022.1 | SAMN04488063_0149 | SAMN04488063_2688 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.734 |
SFF75585.1 | SFF75559.1 | SAMN04488063_0150 | SAMN04488063_0149 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.896 |
SFF75585.1 | SFF92859.1 | SAMN04488063_0150 | SAMN04488063_0830 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.504 |
SFF75585.1 | SFG64022.1 | SAMN04488063_0150 | SAMN04488063_2688 | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.734 |
SFF80955.1 | SFF89567.1 | SAMN04488063_0372 | SAMN04488063_0696 | Helix-turn-helix domain-containing protein. | Flagellar protein FlaJ. | 0.641 |
SFF80955.1 | SFF92859.1 | SAMN04488063_0372 | SAMN04488063_0830 | Helix-turn-helix domain-containing protein. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.462 |
SFF80955.1 | SFG04282.1 | SAMN04488063_0372 | SAMN04488063_1235 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.666 |
SFF80955.1 | SFG52608.1 | SAMN04488063_0372 | SAMN04488063_2309 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.562 |
SFF80955.1 | SFG79573.1 | SAMN04488063_0372 | SAMN04488063_2971 | Helix-turn-helix domain-containing protein. | Thiol-disulfide isomerase or thioredoxin. | 0.440 |
SFF89567.1 | SFF80955.1 | SAMN04488063_0696 | SAMN04488063_0372 | Flagellar protein FlaJ. | Helix-turn-helix domain-containing protein. | 0.641 |
SFF89567.1 | SFF92859.1 | SAMN04488063_0696 | SAMN04488063_0830 | Flagellar protein FlaJ. | Thiosulfate dehydrogenase [quinone] large subunit. | 0.536 |
SFF89567.1 | SFG04282.1 | SAMN04488063_0696 | SAMN04488063_1235 | Flagellar protein FlaJ. | Hypothetical protein. | 0.639 |
SFF89567.1 | SFG06959.1 | SAMN04488063_0696 | SAMN04488063_1327 | Flagellar protein FlaJ. | Flagella accessory protein C (FlaC). | 0.728 |
SFF89567.1 | SFG52608.1 | SAMN04488063_0696 | SAMN04488063_2309 | Flagellar protein FlaJ. | Hypothetical protein. | 0.508 |
SFF89567.1 | SFG79573.1 | SAMN04488063_0696 | SAMN04488063_2971 | Flagellar protein FlaJ. | Thiol-disulfide isomerase or thioredoxin. | 0.410 |
SFF92859.1 | SFF75559.1 | SAMN04488063_0830 | SAMN04488063_0149 | Thiosulfate dehydrogenase [quinone] large subunit. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.562 |
SFF92859.1 | SFF75585.1 | SAMN04488063_0830 | SAMN04488063_0150 | Thiosulfate dehydrogenase [quinone] large subunit. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.504 |
SFF92859.1 | SFF80955.1 | SAMN04488063_0830 | SAMN04488063_0372 | Thiosulfate dehydrogenase [quinone] large subunit. | Helix-turn-helix domain-containing protein. | 0.462 |
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